Main Page
From PhylogenyWiki
Welcome to the Morphster Wiki. Here you will find documentation related to the Morphster project at UT.
| Table of contents |
Background Research
LSID
LSID Source Forge (http://lsid.sourceforge.net/)
TDWG Globally Unique Identifiers Wiki (http://wiki.gbif.org/guidwiki/wikka.php?wakka=HomePage)
Technologies and Mappings
Technologies and Mappings Page
Semantic Web Cake
Existing Ontologies, instances and tools
Ontology Editor - Protégé (http://protege.stanford.edu/index.html)
Survey of Editing Tools (http://www.xml.com/2002/11/06/Ontology_Editor_Survey.html)
Ontology Locking
Database Work (P2P DBs, OBO/OWL Ontologies)
Database effort for Gene Ontology
Taxonomic Name Servers
Related Tools and Projects
BioCorder (http://www.biocorder.org/)
NaviKey (http://www.navikey.net/)
Sematic Web and Image Annotation
Semantic Web/WC3/Image Annotation (http://www.w3.org/TR/swbp-image-annotation/)
Documentation
Help
Please see documentation on customizing the interface (http://meta.wikipedia.org/wiki/MediaWiki_i18n) and the User's Guide (http://meta.wikipedia.org/wiki/MediaWiki_User%27s_Guide) for usage and configuration help.
Julian Suggests
Sapna (and Dan, you may find this interesting too)
Here is what looks like a very good tutorial on Eclipse and Cloudscape.
Building dynamic Web applications is easy using Eclipse, the Web Tools Platform (WTP) for Eclipse, Derby, and Jakarta-Tomcat. Learn how to install and configure all of the required Open Source components, and build a complete web application using JSPs and servlets to store and retrieve information from a Derby database.
http://www-128.ibm.com/developerworks/db2/library/techarticle/dm-0509cline/?ca=dgr-lnxw09WebApps
Discussions
Software Engineering
Fish Source Material
Example Amia ontology uploaded as plain text in Fish Source Material. Save as .obo to open in editor.
Group Meeting
2006.07.14 1:30~3:30 ACES 5.444 Notes, by Rui Mao (http://aug.csres.utexas.edu/PhylogenyWiki/images/4/41/Meeting20060714.doc)
2006.07.17 2:00~5:00 ACES 6.116 Notes, by Rui Mao (http://aug.csres.utexas.edu/PhylogenyWiki/images/1/12/Groupmeeting20060717.ppt), updated by Kerin (http://aug.csres.utexas.edu/PhylogenyWiki/images/b/b8/Groupmeeting20060717kmc.ppt)
2006.07.18 2:00~5:00 ACES 6.116 Notes, by Kerin, Mory (http://aug.csres.utexas.edu/PhylogenyWiki/images/2/2f/Groupmeeting20060718.ppt)
2006.07.24 2:00~5:00 ACES 6.116 Notes, by Kerin (http://aug.csres.utexas.edu/PhylogenyWiki/images/0/0c/MorphsterOutlinekmc.ppt)
